350 lines
15 KiB
Python
350 lines
15 KiB
Python
import os
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import sys
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from collections import defaultdict
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from datetime import datetime
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from os import listdir
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from os.path import isfile, join
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import matplotlib.pyplot as plt
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import numpy as np
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from scipy.stats import ks_2samp
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from common import imprt
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colors = {'neg': 'red', 'neu': 'green', 'pos': 'blue', 'com': 'orange'}
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IMAGE_MAGICK = "magick"
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def main(folder):
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outputdir = folder + "/output/ksbatch/"
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os.system("mkdir -p " + outputdir)
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srcfolder = folder + "/output/batch/"
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onlyfiles = [srcfolder + f for f in listdir(srcfolder) if isfile(join(srcfolder, f)) and f.endswith(".py") and "newusers" in f]
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onlyfiles = sorted(onlyfiles)
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# plotbypost(onlyfiles, outputdir)
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# plotbydate(onlyfiles, outputdir)
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oldfiles = [srcfolder + f for f in listdir(srcfolder) if isfile(join(srcfolder, f)) and f.endswith(".py") and "oldusers" in f]
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oldfiles = sorted(oldfiles)
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plotbydateold(onlyfiles, oldfiles, outputdir)
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def plotbypost(onlyfiles, outputdir):
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print("plotbypost")
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files = defaultdict(list)
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for f in onlyfiles:
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s = f[:-3].split("_")
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files[int(s[5])].append(f)
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files = {p: sorted(l, key=lambda e: datetime.strptime(e.split("_")[3], "%d-%m-%Y")) for (p, l) in files.items()}
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changes_neg = defaultdict(list)
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changes_neu = defaultdict(list)
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changes_pos = defaultdict(list)
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changes_com = defaultdict(list)
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for (p, l) in files.items():
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if len(l) < 2:
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continue
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print(p)
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for i in range(len(l) - 1):
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tox1 = imprt(l[i]).toxlevels
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tox2 = imprt(l[i + 1]).toxlevels
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neglevelsflat1 = [item['neg'] for item in tox1]
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neulevelsflat1 = [item['neu'] for item in tox1]
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poslevelsflat1 = [item['pos'] for item in tox1]
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comlevelsflat1 = [item['compound'] for item in tox1]
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neglevelsflat2 = [item['neg'] for item in tox2]
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neulevelsflat2 = [item['neu'] for item in tox2]
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poslevelsflat2 = [item['pos'] for item in tox2]
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comlevelsflat2 = [item['compound'] for item in tox2]
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ksneg = ks_2samp(neglevelsflat1, neglevelsflat2)
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ksneu = ks_2samp(neulevelsflat1, neulevelsflat2)
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kspos = ks_2samp(poslevelsflat1, poslevelsflat2)
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kscom = ks_2samp(comlevelsflat1, comlevelsflat2)
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changes_neg[p].append(ksneg)
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changes_neu[p].append(ksneu)
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changes_pos[p].append(kspos)
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changes_com[p].append(kscom)
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for (p, l) in files.items():
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with open(outputdir + "/ks_post_" + str(p) + ".log", "w") as f:
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for i in range(len(l) - 1):
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f1 = l[i]
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f2 = l[i + 1]
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f.write(f1 + " -> " + f2 + ": ks neg = " + str(changes_neg[p][i]) + "; ks neu = " + str(changes_neu[p][i])
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+ "; ks pos = " + str(changes_pos[p][i]) + "; ks com = " + str(changes_com[p][i]) + "\n")
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# pval
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for (p, l) in files.items():
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x = [l[i].split("_")[3] + " -\n" + l[i + 1].split("_")[3] for i in range(len(l) - 1)]
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fig = plt.figure(figsize=(16, 12))
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for type, changes in {"neg": changes_neg[p], "neu": changes_neu[p], "pos": changes_pos[p], "com": changes_com[p]}.items():
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pval = [x.pvalue for x in changes]
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plt.plot(x, pval, label=type + ".pval", color=colors[type])
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mean = np.mean(pval)
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std = np.std(pval)
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dev = [(xx, s) for (xx, s) in zip(x, pval) if s <= mean - std or s >= mean + std]
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plt.plot(x, [mean] * len(pval), color=colors[type], ls='dashed')
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plt.plot([xx for (xx, s) in dev], [s for (xx, s) in dev], color=colors[type], ls='None', marker='o')
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plt.title("KS 2-sided test with max " + str(p) + " posts")
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plt.xticks(rotation=90)
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plt.legend(loc="upper right")
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plt.savefig(outputdir + "/ks_post_pval_" + str(p) + ".png", bbox_inches='tight')
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plt.close(fig)
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# stat
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for (p, l) in files.items():
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x = [l[i].split("_")[3] + " -\n" + l[i + 1].split("_")[3] for i in range(len(l) - 1)]
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fig = plt.figure(figsize=(16, 12))
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for type, changes in {"neg": changes_neg[p], "neu": changes_neu[p], "pos": changes_pos[p], "com": changes_com[p]}.items():
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stat = [x.statistic for x in changes]
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plt.plot(x, stat, label=type + ".stat", color=colors[type])
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mean = np.mean(stat)
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std = np.std(stat)
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dev = [(xx, s) for (xx, s) in zip(x, stat) if s <= mean - std or s >= mean + std]
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plt.plot(x, [mean] * len(stat), color=colors[type], ls='dashed')
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plt.plot([xx for (xx, s) in dev], [s for (xx, s) in dev], color=colors[type], ls='None', marker='o')
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plt.title("KS 2-sided test with max " + str(p) + " posts")
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plt.xticks(rotation=90)
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plt.legend(loc="upper right")
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plt.savefig(outputdir + "/ks_post_stat_" + str(p) + ".png", bbox_inches='tight')
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plt.close(fig)
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def plotbydate(onlyfiles, outputdir):
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print("plotbydate")
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files = defaultdict(list)
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for f in onlyfiles:
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s = f[:-3].split("_")
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files[(s[3], s[4])].append(f)
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files = {d: sorted(l, key=lambda e: e.split("_")[5]) for (d, l) in files.items()}
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changes_neg = defaultdict(list)
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changes_neu = defaultdict(list)
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changes_pos = defaultdict(list)
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changes_com = defaultdict(list)
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for (d, l) in files.items():
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if len(l) < 2:
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continue
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print(d)
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for i in range(len(l) - 1):
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tox1 = imprt(l[i]).toxlevels
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tox2 = imprt(l[i + 1]).toxlevels
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neglevelsflat1 = [item['neg'] for item in tox1]
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neulevelsflat1 = [item['neu'] for item in tox1]
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poslevelsflat1 = [item['pos'] for item in tox1]
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comlevelsflat1 = [item['compound'] for item in tox1]
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neglevelsflat2 = [item['neg'] for item in tox2]
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neulevelsflat2 = [item['neu'] for item in tox2]
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poslevelsflat2 = [item['pos'] for item in tox2]
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comlevelsflat2 = [item['compound'] for item in tox2]
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ksneg = ks_2samp(neglevelsflat1, neglevelsflat2)
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ksneu = ks_2samp(neulevelsflat1, neulevelsflat2)
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kspos = ks_2samp(poslevelsflat1, poslevelsflat2)
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kscom = ks_2samp(comlevelsflat1, comlevelsflat2)
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changes_neg[d].append(ksneg)
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changes_neu[d].append(ksneu)
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changes_pos[d].append(kspos)
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changes_com[d].append(kscom)
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for (d, l) in files.items():
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with open(outputdir + "/ks_date_" + d[0] + "_" + d[1] + ".log", "w") as f:
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for i in range(len(l) - 1):
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f1 = l[i]
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f2 = l[i + 1]
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f.write(f1 + " -> " + f2 + ": ks neg = " + str(changes_neg[d][i]) + "; ks neu = " + str(changes_neu[d][i])
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+ "; ks pos = " + str(changes_pos[d][i]) + "; ks com = " + str(changes_com[d][i]) + "\n")
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# pval
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for (d, l) in files.items():
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x = [l[i].split("_")[5][:-3] + "-" + l[i + 1].split("_")[5][:-3] for i in range(len(l) - 1)]
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fig = plt.figure(figsize=(16, 12))
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for type, changes in {"neg": changes_neg[d], "neu": changes_neu[d], "pos": changes_pos[d], "com": changes_com[d]}.items():
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pval = [x.pvalue for x in changes]
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plt.plot(x, pval, label=type + ".pval", color=colors[type])
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mean = np.mean(pval)
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std = np.std(pval)
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dev = [(xx, s) for (xx, s) in zip(x, pval) if s <= mean - std or s >= mean + std]
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plt.plot(x, [mean] * len(pval), color=colors[type], ls='dashed')
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plt.plot([xx for (xx, s) in dev], [s for (xx, s) in dev], color=colors[type], ls='None', marker='o')
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plt.title("KS 2-sided test with between " + d[0] + " and " + d[1])
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plt.xticks(rotation=90)
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plt.legend(loc="upper right")
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plt.savefig(outputdir + "/ks_date_pval_" + d[0] + "_" + d[1] + ".png", bbox_inches='tight')
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plt.close(fig)
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# stat
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for (d, l) in files.items():
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x = [l[i].split("_")[5][:-3] + "-" + l[i + 1].split("_")[5][:-3] for i in range(len(l) - 1)]
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fig = plt.figure(figsize=(16, 12))
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for type, changes in {"neg": changes_neg[d], "neu": changes_neu[d], "pos": changes_pos[d], "com": changes_com[d]}.items():
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stat = [x.statistic for x in changes]
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plt.plot(x, stat, label=type + ".stat", color=colors[type])
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mean = np.mean(stat)
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std = np.std(stat)
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dev = [(xx, s) for (xx, s) in zip(x, stat) if s <= mean - std or s >= mean + std]
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plt.plot(x, [mean] * len(stat), color=colors[type], ls='dashed')
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plt.plot([xx for (xx, s) in dev], [s for (xx, s) in dev], color=colors[type], ls='None', marker='o')
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plt.title("KS 2-sided test with between " + d[0] + " and " + d[1])
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plt.xticks(rotation=90)
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plt.legend(loc="upper right")
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plt.savefig(outputdir + "/ks_date_stat_" + d[0] + "_" + d[1] + ".png", bbox_inches='tight')
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plt.close(fig)
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def plotbydateold(onlyfiles, oldfiles, outputdir):
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print("plotbydateold")
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files = defaultdict(list)
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for f in onlyfiles:
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s = f[:-3].split("_")
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files[(s[3], s[4])].append(f)
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dates = sorted(files.keys(), key=lambda e: "-".join(reversed(e[0].split("-"))))
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files = {d: files[d] for d in dates}
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files = {d: sorted(l, key=lambda e: e.split("_")[5]) for (d, l) in files.items()}
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oldfiles = {(f[:-3].split("_")[3], f[:-3].split("_")[4]): f for f in oldfiles}
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changes_neg = defaultdict(list)
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changes_neu = defaultdict(list)
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changes_pos = defaultdict(list)
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changes_com = defaultdict(list)
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for (d, l) in files.items():
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print(d)
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toxold = imprt(oldfiles[d]).toxlevels
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neglevelsold = [item['neg'] for item in toxold]
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neulevelsold = [item['neu'] for item in toxold]
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poslevelsold = [item['pos'] for item in toxold]
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comlevelsold = [item['compound'] for item in toxold]
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for i in range(len(l)):
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tox1 = imprt(l[i]).toxlevels
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if len(tox1) == 0 or len(toxold) == 0:
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changes_neg[d].append(None)
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changes_neu[d].append(None)
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changes_pos[d].append(None)
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changes_com[d].append(None)
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continue
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neglevelsflat1 = [item['neg'] for item in tox1]
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neulevelsflat1 = [item['neu'] for item in tox1]
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poslevelsflat1 = [item['pos'] for item in tox1]
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comlevelsflat1 = [item['compound'] for item in tox1]
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ksneg = ks_2samp(neglevelsflat1, neglevelsold)
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ksneu = ks_2samp(neulevelsflat1, neulevelsold)
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kspos = ks_2samp(poslevelsflat1, poslevelsold)
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kscom = ks_2samp(comlevelsflat1, comlevelsold)
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changes_neg[d].append(ksneg)
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changes_neu[d].append(ksneu)
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changes_pos[d].append(kspos)
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changes_com[d].append(kscom)
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print("logs")
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for (d, l) in files.items():
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# print(d)
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# print("neg is: " + str(len(changes_neg[d])) + " should: " + str(len(l)))
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# print("neu is: " + str(len(changes_neu[d])) + " should: " + str(len(l)))
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# print("pos is: " + str(len(changes_pos[d])) + " should: " + str(len(l)))
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# print("com is: " + str(len(changes_com[d])) + " should: " + str(len(l)))
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f1 = oldfiles[d]
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with open(outputdir + "/ks_olddate_" + d[0] + "_" + d[1] + ".log", "w") as f:
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for i in range(len(l)):
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if changes_neg[d][i] is None:
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continue
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f2 = l[i]
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f.write(f1 + " -> " + f2 + ": ks neg = " + str(changes_neg[d][i]) + "; ks neu = " + str(changes_neu[d][i])
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+ "; ks pos = " + str(changes_pos[d][i]) + "; ks com = " + str(changes_com[d][i]) + "\n")
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# pval
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print("pval")
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imgmagickcmd = IMAGE_MAGICK
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for (d, l) in files.items():
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print(d)
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x = [l[i][:-3].split("_")[5] for i in range(len(l))]
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fig = plt.figure(figsize=(16, 12))
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for type, changes in {"neg": changes_neg[d], "neu": changes_neu[d], "pos": changes_pos[d], "com": changes_com[d]}.items():
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pval = [(xx, c.pvalue) for xx, c in zip(x, changes) if c is not None]
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plt.plot([p[0] for p in pval], [p[1] for p in pval], label=type + ".pval", color=colors[type])
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if len(pval) == 0:
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continue
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mean = np.mean([p[1] for p in pval])
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std = np.std([p[1] for p in pval])
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dev = [(xx, s) for (xx, s) in pval if s <= mean - std or s >= mean + std]
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plt.plot([p[0] for p in pval], [mean] * len(pval), color=colors[type], ls='dashed')
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plt.plot([dx[0] for dx in dev], [dx[1] for dx in dev], color=colors[type], ls='None', marker='o')
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plt.title("KS 2-sided test with new and old users between " + d[0] + " and " + d[1])
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plt.xticks(rotation=90)
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plt.legend(loc="upper right")
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outfile = outputdir + "/ks_olddate_pval_" + d[0] + "_" + d[1] + ".png"
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plt.savefig(outfile, bbox_inches='tight')
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plt.close(fig)
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imgmagickcmd += " " + outfile
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os.system(imgmagickcmd + " " + outputdir + "/ks_olddate_pval.pdf")
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# stat
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print("stat")
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imgmagickcmd = IMAGE_MAGICK
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for (d, l) in files.items():
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print(d)
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x = [l[i][:-3].split("_")[5] for i in range(len(l))]
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fig = plt.figure(figsize=(16, 12))
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for type, changes in {"neg": changes_neg[d], "neu": changes_neu[d], "pos": changes_pos[d], "com": changes_com[d]}.items():
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stat = [(xx, c.statistic) for xx, c in zip(x, changes) if c is not None]
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plt.plot([p[0] for p in stat], [p[1] for p in stat], label=type + ".stat", color=colors[type])
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if len(stat) == 0:
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continue
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mean = np.mean([p[1] for p in stat])
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std = np.std([p[1] for p in stat])
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dev = [(xx, s) for (xx, s) in stat if s <= mean - std or s >= mean + std]
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plt.plot([p[0] for p in stat], [mean] * len(stat), color=colors[type], ls='dashed')
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plt.plot([dx[0] for dx in dev], [dx[1] for dx in dev], color=colors[type], ls='None', marker='o')
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plt.title("KS 2-sided test with new and old users between " + d[0] + " and " + d[1])
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plt.xticks(rotation=90)
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plt.legend(loc="upper right")
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outfile = outputdir + "/ks_olddate_stat_" + d[0] + "_" + d[1] + ".png"
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plt.savefig(outfile, bbox_inches='tight')
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plt.close(fig)
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imgmagickcmd += " " + outfile
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os.system(imgmagickcmd + " " + outputdir + "/ks_olddate_stat.pdf")
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def filecmp(file1, file2):
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if file1 == file2:
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return 0
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s1 = file1.split("_")
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s2 = file2.split("_")
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d1 = datetime.strptime(s1[2], "%d-%m-%Y")
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d2 = datetime.strptime(s2[2], "%d-%m-%Y")
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if d1 < d2:
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return -1
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elif d1 > d2:
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return 1
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return 0
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if __name__ == "__main__":
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# execute only if run as a script
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usage = sys.argv[0] + " <folder>"
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if len(sys.argv) < 2:
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print(usage)
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sys.exit(1)
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folder = sys.argv[1]
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if not os.path.isdir(folder):
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print(folder + " is not a folder")
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sys.exit(1)
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main(folder)
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